STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EV00_1916Hypothetical protein; Alternative locus ID: PMIT9322_0600; FIG00940429: hypothetical protein. (57 aa)    
Predicted Functional Partners:
EV00_1917
SAM-dependent methyltransferase; Alternative locus ID: PMIT9322_0601.
       0.575
EV00_1918
Cysteine desulfurase; Alternative locus ID: PMIT9322_0602.
       0.477
EV00_1628
Phosphoribosylaminoimidazole carboxylase ATPase subunit; Alternative locus ID: PMIT9322_0312.
      
 0.424
EV00_1650
Ribonucleotide reductase of class II (coenzyme B12-dependent); Alternative locus ID: PMIT9322_0334.
      
 0.424
EV00_1915
Hypothetical protein; Alternative locus ID: PMIT9322_0599; FIG00940485: hypothetical protein.
       0.403
Your Current Organism:
Prochlorococcus marinus MIT9322
NCBI taxonomy Id: 167550
Other names: P. marinus str. MIT 9322, Prochlorococcus marinus str. MIT 9322
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.