STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMW60453.1HtrA protease/chaperone protein; Belongs to the peptidase S1C family. (507 aa)    
Predicted Functional Partners:
KMW56352.1
Proteasome-activating AAA-ATPase (PAN).
    
 0.887
KMW58059.1
Cell division protein FtsH; Belongs to the AAA ATPase family.
    
 0.887
KMW56981.1
Phage tail assembly protein.
  
 0.744
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.702
KMW57637.1
Glycerol kinase.
   
 0.702
KMW57297.1
Membrane-associated zinc metalloprotease.
 
  
 0.681
KMW59935.1
PAS/PAC sensor hybrid histidine kinase.
 
  
 0.618
KMW58139.1
Hypothetical protein.
  
 0.611
KMW60808.1
WD-40 repeat protein.
  
 
  0.604
KMW56542.1
WD domain/cytochrome c family protein.
   
 0.604
Your Current Organism:
Rhodobacter lobularis
NCBI taxonomy Id: 1675527
Other names: C. Rhodobacter lobularis, Candidatus Rhodobacter lobularis, alpha proteobacterium symbiont of Oscarella lobularis
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