STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMW56117.1Putative membrane protein of unknown function. (505 aa)    
Predicted Functional Partners:
KMW56115.1
Propionyl-CoA carboxylase biotin-containing subunit.
       0.786
KMW56116.1
Hypothetical protein.
       0.773
KMW59528.1
Putative membrane protein; Belongs to the UbiA prenyltransferase family.
 
  
 0.747
KMW59529.1
Putative membrane protein.
 
  
 0.745
KMW56557.1
Hypothetical protein.
  
     0.588
ubiA
4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
  
  
 0.529
KMW59532.1
Integral membrane protein.
 
  
 0.521
KMW56114.1
Hypothetical protein.
       0.501
KMW58956.1
Dolichol-phosphate mannosyltransferase-like protein.
  
 
 0.466
KMW59489.1
Hypothetical protein.
  
     0.463
Your Current Organism:
Rhodobacter lobularis
NCBI taxonomy Id: 1675527
Other names: C. Rhodobacter lobularis, Candidatus Rhodobacter lobularis, alpha proteobacterium symbiont of Oscarella lobularis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.