STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMW59485.1Phenylacetic acid degradation protein PaaD, thioesterase. (138 aa)    
Predicted Functional Partners:
KMW59486.1
ICC-like protein phosphoesterase.
       0.848
KMW60174.1
Phenylacetate-coenzyme A ligase.
 
 
 0.761
KMW56502.1
Isovaleryl-CoA dehydrogenase.
   
    0.706
KMW60185.1
Long-chain-fatty-acid--CoA ligase.
 
   
 0.698
KMW58242.1
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase.
  
 
  0.647
KMW59487.1
ATP-dependent helicase, DEAD/DEAH box family; Associated with Flp pilus assembly.
       0.611
KMW60176.1
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein.
  
     0.610
KMW60270.1
Phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
 
  0.605
KMW60177.1
Branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.
  
     0.559
KMW60175.1
Branched-chain amino acid transport ATP-binding protein LivF.
  
  
  0.555
Your Current Organism:
Rhodobacter lobularis
NCBI taxonomy Id: 1675527
Other names: C. Rhodobacter lobularis, Candidatus Rhodobacter lobularis, alpha proteobacterium symbiont of Oscarella lobularis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.