STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMW47792.1Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)    
Predicted Functional Partners:
KMW46838.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.980
KMW46486.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.980
KMW45746.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.980
KMW44714.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.980
KMW44293.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.980
KMW44366.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.980
KMW47484.1
General secretion pathway protein GspE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.894
KMW46864.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.891
KMW45990.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.891
KMW45728.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.891
Your Current Organism:
Ralstonia sp. MD27
NCBI taxonomy Id: 1676617
Other names: R. sp. MD27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.