STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111849937Uncharacterized protein. (435 aa)    
Predicted Functional Partners:
prickle2
Prickle homolog 2b.
      
 0.526
prickle1
Prickle homolog 1a.
      
 0.520
vangl2
Vang-like protein.
      
 0.512
Rchy1
Ring finger and CHY zinc finger domain containing 1.
   
    0.497
vangl1
Vang-like protein.
      
 0.474
cfap54
Uncharacterized protein.
   
  
 0.467
LOC111833275
Uncharacterized protein.
   
  
 0.467
nkx2-5
NK2 homeobox 5.
    
 
 0.467
Gnb1l
Guanine nucleotide binding protein (G protein), beta polypeptide 1-like.
      
 0.461
LOC111853137
Homeobox domain-containing protein.
    
 
 0.440
Your Current Organism:
Paramormyrops kingsleyae
NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.