STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vps50VPS50 EARP/GARPII complex subunit. (934 aa)    
Predicted Functional Partners:
vps51
VPS51 subunit of GARP complex.
    
 0.990
vps53
VPS53 subunit of GARP complex.
    
 
 0.989
Vps52
VPS52 subunit of GARP complex.
   
 
 0.939
vps54
VPS54 subunit of GARP complex.
   
 
 0.882
eipr1
EARP complex and GARP complex interacting protein 1.
    
 
 0.867
ccdc186
Si:ch211-225b10.4.
      
 0.661
dym
Dymeclin.
   
  
 0.621
ENSPKIP00000003582
Uncharacterized protein.
      
 0.615
Gak
Cyclin G associated kinase.
   
  
 0.588
hepacam2
HEPACAM family member 2.
      
 0.547
Your Current Organism:
Paramormyrops kingsleyae
NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.