STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111848287BHLH domain-containing protein. (129 aa)    
Predicted Functional Partners:
tcf12
Transcription factor 12.
    
 
 0.635
ENSPKIP00000011349
Transcription factor 3b.
    
 
 0.635
TCF3
Transcription factor 3.
    
 
 0.635
TCF4
Transcription factor 4.
    
 
 0.635
LOC111846776
Transcription factor 12.
    
 
 0.635
LOC111859486
Achaete-scute family bHLH transcription factor 1b.
    
 0.577
Ascl1
Achaete-scute family bHLH transcription factor 1a.
    
 0.577
LOC111841325
BHLH domain-containing protein.
    
 0.577
ENSPKIP00000023221
Nanos-type domain-containing protein; Belongs to the nanos family.
      
 0.574
LOC111856854
Ets variant 2.
     
 0.507
Your Current Organism:
Paramormyrops kingsleyae
NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.