STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111840383CCHC-type zinc finger, nucleic acid binding protein a. (164 aa)    
Predicted Functional Partners:
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
  
 0.630
ENSPKIP00000028739
Heterogeneous nuclear ribonucleoprotein K, like.
   
  
 0.630
mtrex
Mtr4 exosome RNA helicase.
   
 
 0.609
mrm2
Mitochondrial rRNA methyltransferase 2.
   
 
 0.525
skiv2l
SKI2 homolog, superkiller viralicidic activity 2-like.
   
 
 0.447
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.442
ENSPKIP00000000011
SERPINE1 mRNA binding protein 1b.
   
 
 0.440
ENSPKIP00000036615
SERPINE1 mRNA binding protein 1a.
   
 
 0.440
Cisd3
Uncharacterized protein.
      
 0.432
fbl
Fibrillarin.
   
 
 0.429
Your Current Organism:
Paramormyrops kingsleyae
NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae
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