STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spoVAD1Stage V sporulation protein AD; High confidence in function and specificity. (334 aa)    
Predicted Functional Partners:
P22_0120
Putative membrane protein.
 
  
 0.983
P22_0122
Putative membrane protein.
 
  
 0.962
P22_0126
Putative membrane protein.
 
  
 0.950
P22_3607
Putative membrane protein.
 
  
 0.928
gpr
Germination protease; High confidence in function and specificity.
  
  
 0.924
P22_0125
Hypothetical protein.
  
  
 0.875
P22_0116
Hypothetical protein; Family membership.
 
  
 0.870
P22_3609
Putative membrane protein.
 
  
 0.862
sigF
RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
     0.859
P22_3332
Hypothetical protein; Family membership.
  
  
 0.822
Your Current Organism:
Propionispora sp. 2237
NCBI taxonomy Id: 1677858
Other names: P. sp. 2/2-37, Propionispora sp. 2/2-37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.