Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
P22_0951 | P22_1792 | P22_0951 | P22_1792 | Hypothetical protein; Family membership. | Hypothetical protein; Family membership. | 0.962 |
P22_0951 | P22_1795 | P22_0951 | P22_1795 | Hypothetical protein; Family membership. | Hypothetical protein; Family membership. | 0.990 |
P22_0951 | P22_2897 | P22_0951 | P22_2897 | Hypothetical protein; Family membership. | Hypothetical protein; Family membership. | 0.949 |
P22_0951 | cheA | P22_0951 | P22_2197 | Hypothetical protein; Family membership. | Chemotaxis protein CheA; High confidence in function and specificity. | 0.990 |
P22_0951 | cheB | P22_0951 | P22_2196 | Hypothetical protein; Family membership. | Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.965 |
P22_0951 | cheR | P22_0951 | P22_3703 | Hypothetical protein; Family membership. | Chemotaxis protein methyltransferase; High confidence in function and specificity. | 0.959 |
P22_0951 | cheV | P22_0951 | P22_3601 | Hypothetical protein; Family membership. | Chemotaxis protein CheV; High confidence in function and specificity. | 0.925 |
P22_1536 | P22_1792 | P22_1536 | P22_1792 | Hypothetical protein. | Hypothetical protein; Family membership. | 0.962 |
P22_1536 | P22_1795 | P22_1536 | P22_1795 | Hypothetical protein. | Hypothetical protein; Family membership. | 0.992 |
P22_1536 | P22_2897 | P22_1536 | P22_2897 | Hypothetical protein. | Hypothetical protein; Family membership. | 0.949 |
P22_1536 | cheA | P22_1536 | P22_2197 | Hypothetical protein. | Chemotaxis protein CheA; High confidence in function and specificity. | 0.992 |
P22_1536 | cheB | P22_1536 | P22_2196 | Hypothetical protein. | Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.970 |
P22_1536 | cheR | P22_1536 | P22_3703 | Hypothetical protein. | Chemotaxis protein methyltransferase; High confidence in function and specificity. | 0.959 |
P22_1536 | cheV | P22_1536 | P22_3601 | Hypothetical protein. | Chemotaxis protein CheV; High confidence in function and specificity. | 0.923 |
P22_1792 | P22_0951 | P22_1792 | P22_0951 | Hypothetical protein; Family membership. | Hypothetical protein; Family membership. | 0.962 |
P22_1792 | P22_1536 | P22_1792 | P22_1536 | Hypothetical protein; Family membership. | Hypothetical protein. | 0.962 |
P22_1792 | P22_1794 | P22_1792 | P22_1794 | Hypothetical protein; Family membership. | Hypothetical protein. | 0.978 |
P22_1792 | P22_1795 | P22_1792 | P22_1795 | Hypothetical protein; Family membership. | Hypothetical protein; Family membership. | 0.982 |
P22_1792 | P22_2198 | P22_1792 | P22_2198 | Hypothetical protein; Family membership. | Hypothetical protein. | 0.962 |
P22_1792 | P22_2897 | P22_1792 | P22_2897 | Hypothetical protein; Family membership. | Hypothetical protein; Family membership. | 0.914 |
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