STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGI88288.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0763 family. (146 aa)    
Predicted Functional Partners:
argF
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
       0.820
hemN
Coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
       0.820
KGI88290.1
Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.815
KGI88286.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.636
motB
Flagellar motor protein MotB; With MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.623
fliY
Flagellar motor switch protein FliY; One of three proteins involved in switching the direction of the flagellar rotation; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.623
KGI88285.1
Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.581
KGI88291.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.496
Your Current Organism:
Helicobacter jaachi
NCBI taxonomy Id: 1677920
Other names: ATCC TSD-45, H. jaachi, Helicobacter jaachi Shen et al. 2017, Helicobacter sp. MIT 09-6948, Helicobacter sp. MIT 09-6949, LMG 28613, LMG:28613, strain MIT 09-6949
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.