STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGI87955.1Cytochrome C peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1021 aa)    
Predicted Functional Partners:
KGI87954.1
Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.976
KGI87953.1
Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.920
KGI87041.1
Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.808
KGI87788.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.746
KGI87742.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.716
KGI87787.1
Macrolide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.711
folP
Dihydropteroate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.615
KGI87950.1
DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.612
KGI87949.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.610
KGI87952.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.610
Your Current Organism:
Helicobacter jaachi
NCBI taxonomy Id: 1677920
Other names: ATCC TSD-45, H. jaachi, Helicobacter jaachi Shen et al. 2017, Helicobacter sp. MIT 09-6948, Helicobacter sp. MIT 09-6949, LMG 28613, LMG:28613, strain MIT 09-6949
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.