STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIK10763.1Export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)    
Predicted Functional Partners:
OIK10764.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.977
OIK10762.1
Cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.847
OIK16023.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.819
atpD
F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.791
atpA
F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.782
OIK16045.1
Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.778
OIK17015.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.776
OIK16044.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.776
OIK15608.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.776
OIK15647.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  0.776
Your Current Organism:
Bacillus sp. MUM116
NCBI taxonomy Id: 1678002
Other names: B. sp. MUM 116, Bacillus sp. MUM 116
Server load: low (12%) [HD]