STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001683985_02273Unannotated protein. (329 aa)    
Predicted Functional Partners:
GCA_001683985_00546
Unannotated protein.
  
  0.990
GCA_001683985_00309
Unannotated protein.
 
  
 0.956
GCA_001683985_00172
Unannotated protein.
 
  
 0.922
GCA_001683985_01124
Unannotated protein.
 
  
 0.894
GCA_001683985_02605
Unannotated protein.
 
 
 0.893
GCA_001683985_00310
Unannotated protein.
 
  
 0.861
GCA_001683985_00308
Unannotated protein.
 
  
 0.850
GCA_001683985_02272
Unannotated protein.
       0.801
GCA_001683985_02698
Unannotated protein.
 
  
 0.750
GCA_001683985_02271
Unannotated protein.
       0.689
Your Current Organism:
Smithella sp. M82
NCBI taxonomy Id: 1678137
Other names: S. sp. M82
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.