STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNB53398.1Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (795 aa)    
Predicted Functional Partners:
KNB53397.1
(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
KNB50587.1
(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
KNB53396.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.998
KNB49338.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.994
KNB50588.1
Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.983
KNB50607.1
FAD dependent dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.941
KNB50590.1
XshC-Cox1-family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.878
KNB49337.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.869
KNB53431.1
Hydroxydechloroatrazine ethylaminohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.854
KNB53435.1
4-diphosphocytidyl-2C-methyl-D-erythritol synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.827
Your Current Organism:
Streptomyces caatingaensis
NCBI taxonomy Id: 1678637
Other names: S. caatingaensis
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