STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNB53569.1Phenazine biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)    
Predicted Functional Partners:
KNB53573.1
Phenazine biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.943
KNB53572.1
2,3-dihydro-3-hydroxyanthranilate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.927
KNB53574.1
Phenazine biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
0.920
pdxH
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
  
 
  0.773
KNB54201.1
Phospho-2-dehydro-3-deoxyheptonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II DAHP synthase family.
  
    0.567
KNB53570.1
Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.504
KNB53571.1
Anthranilate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.437
Your Current Organism:
Streptomyces caatingaensis
NCBI taxonomy Id: 1678637
Other names: S. caatingaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.