KNB53585.1 protein (Streptomyces caatingaensis)

Nodes:

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

KNB53585.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa)

Predicted Functional Partners:

KNB53584.1

0.999

KNB53586.1

0.999

KNB53587.1

0.999

KNB53588.1

0.999

cas1

0.967

KNB53590.1

0.966

KNB53583.1

0.957

KNB49877.1

0.598

Your Current Organism:

Streptomyces caatingaensis

NCBI taxonomy Id: 1678637
Other names: S. caatingaensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KNB49877.1	KNB53584.1	AC230_24320	AC230_02770	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CRISPR-associated protein Cse1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.598
KNB49877.1	KNB53585.1	AC230_24320	AC230_02775	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.598
KNB49877.1	KNB53588.1	AC230_24320	AC230_02790	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CRISPR-associated protein Cas3; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.431
KNB53583.1	KNB53584.1	AC230_02765	AC230_02770	CRISPR-associated protein Cas3; Derived by automated computational analysis using gene prediction method: Protein Homology.	CRISPR-associated protein Cse1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
KNB53583.1	KNB53585.1	AC230_02765	AC230_02775	CRISPR-associated protein Cas3; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.957
KNB53583.1	KNB53586.1	AC230_02765	AC230_02780	CRISPR-associated protein Cas3; Derived by automated computational analysis using gene prediction method: Protein Homology.	CRISPR-associated protein Cse4; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KNB53583.1	KNB53587.1	AC230_02765	AC230_02785	CRISPR-associated protein Cas3; Derived by automated computational analysis using gene prediction method: Protein Homology.	CRISPR-associated protein Cas5; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KNB53583.1	KNB53588.1	AC230_02765	AC230_02790	CRISPR-associated protein Cas3; Derived by automated computational analysis using gene prediction method: Protein Homology.	CRISPR-associated protein Cas3; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KNB53583.1	KNB53590.1	AC230_02765	AC230_02800	CRISPR-associated protein Cas3; Derived by automated computational analysis using gene prediction method: Protein Homology.	CRISPR-associated protein Cas2; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
KNB53583.1	cas1	AC230_02765	AC230_02795	CRISPR-associated protein Cas3; Derived by automated computational analysis using gene prediction method: Protein Homology.	CRISPR-associated protein Cse1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.	0.956
KNB53584.1	KNB49877.1	AC230_02770	AC230_24320	CRISPR-associated protein Cse1; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.598
KNB53584.1	KNB53583.1	AC230_02770	AC230_02765	CRISPR-associated protein Cse1; Derived by automated computational analysis using gene prediction method: Protein Homology.	CRISPR-associated protein Cas3; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
KNB53584.1	KNB53585.1	AC230_02770	AC230_02775	CRISPR-associated protein Cse1; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KNB53584.1	KNB53586.1	AC230_02770	AC230_02780	CRISPR-associated protein Cse1; Derived by automated computational analysis using gene prediction method: Protein Homology.	CRISPR-associated protein Cse4; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KNB53584.1	KNB53587.1	AC230_02770	AC230_02785	CRISPR-associated protein Cse1; Derived by automated computational analysis using gene prediction method: Protein Homology.	CRISPR-associated protein Cas5; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KNB53584.1	KNB53588.1	AC230_02770	AC230_02790	CRISPR-associated protein Cse1; Derived by automated computational analysis using gene prediction method: Protein Homology.	CRISPR-associated protein Cas3; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KNB53584.1	KNB53590.1	AC230_02770	AC230_02800	CRISPR-associated protein Cse1; Derived by automated computational analysis using gene prediction method: Protein Homology.	CRISPR-associated protein Cas2; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.928
KNB53584.1	cas1	AC230_02770	AC230_02795	CRISPR-associated protein Cse1; Derived by automated computational analysis using gene prediction method: Protein Homology.	CRISPR-associated protein Cse1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.	0.953
KNB53585.1	KNB49877.1	AC230_02775	AC230_24320	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.598
KNB53585.1	KNB53583.1	AC230_02775	AC230_02765	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CRISPR-associated protein Cas3; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.957