KNB53648.1 protein (Streptomyces caatingaensis)

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

KNB53648.1

Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)

Predicted Functional Partners:

KNB51369.1

0.791

KNB52653.1

0.772

rpoB

0.642

rpoZ

0.595

rpoC

0.595

rpoA

0.595

KNB50397.1

0.594

KNB53649.1

0.562

KNB50320.1

0.562

KNB49591.1

0.562

Your Current Organism:

Streptomyces caatingaensis

NCBI taxonomy Id: 1678637
Other names: S. caatingaensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KNB49591.1	KNB50320.1	AC230_29600	AC230_24495	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.885
KNB49591.1	KNB51369.1	AC230_29600	AC230_17520	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KNB49591.1	KNB53648.1	AC230_29600	AC230_03220	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.562
KNB50320.1	KNB49591.1	AC230_24495	AC230_29600	Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.885
KNB50320.1	KNB51369.1	AC230_24495	AC230_17520	Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KNB50320.1	KNB53648.1	AC230_24495	AC230_03220	Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.562
KNB50397.1	KNB53648.1	AC230_22315	AC230_03220	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.594
KNB51369.1	KNB49591.1	AC230_17520	AC230_29600	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KNB51369.1	KNB50320.1	AC230_17520	AC230_24495	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KNB51369.1	KNB52653.1	AC230_17520	AC230_08305	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.970
KNB51369.1	KNB53648.1	AC230_17520	AC230_03220	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.791
KNB51369.1	rpoA	AC230_17520	AC230_25985	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.512
KNB51369.1	rpoB	AC230_17520	AC230_25665	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.768
KNB51369.1	rpoC	AC230_17520	AC230_25670	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.734
KNB51369.1	rpoZ	AC230_17520	AC230_24300	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.605
KNB52653.1	KNB51369.1	AC230_08305	AC230_17520	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.970
KNB52653.1	KNB53648.1	AC230_08305	AC230_03220	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.772
KNB52653.1	rpoA	AC230_08305	AC230_25985	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.479
KNB52653.1	rpoB	AC230_08305	AC230_25665	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.755
KNB52653.1	rpoC	AC230_08305	AC230_25670	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.727