STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNB53667.1Teichoic acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)    
Predicted Functional Partners:
KNB53666.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
KNB49309.1
Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.897
KNB49575.1
Phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.863
KNB53665.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.856
KNB49579.1
Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.843
KNB53664.1
Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.816
KNB53663.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.805
KNB53662.1
Nucleotide sugar-1-phosphate transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.790
KNB53660.1
UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.772
KNB53661.1
Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
    0.759
Your Current Organism:
Streptomyces caatingaensis
NCBI taxonomy Id: 1678637
Other names: S. caatingaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.