STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNB53785.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)    
Predicted Functional Partners:
KNB53786.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.987
KNB50052.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.771
KNB50051.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.688
KNB50437.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.646
KNB50434.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.641
KNB50436.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.641
KNB52518.1
ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.634
KNB50433.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.634
KNB53787.1
Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.601
KNB50476.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.
       0.584
Your Current Organism:
Streptomyces caatingaensis
NCBI taxonomy Id: 1678637
Other names: S. caatingaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.