STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNB53817.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (611 aa)    
Predicted Functional Partners:
KNB53816.1
Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
0.915
KNB50454.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.801
KNB53818.1
peptide-N4-asparagine amidase A; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.782
KNB49471.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.781
KNB53282.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.655
KNB49074.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
0.651
KNB53237.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.611
KNB50907.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.611
KNB52265.1
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.609
KNB49904.1
CbxX/CfqX; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.609
Your Current Organism:
Streptomyces caatingaensis
NCBI taxonomy Id: 1678637
Other names: S. caatingaensis
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.