STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNB53861.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (198 aa)    
Predicted Functional Partners:
KNB52761.1
Phage-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.774
KNB51971.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.709
KNB52760.1
F0F1 ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.652
KNB51902.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.573
KNB53034.1
Peptidase M48; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.526
KNB54247.1
Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aminoglycoside phosphotransferase family.
       0.510
KNB51358.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.498
KNB49542.1
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.496
KNB53847.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.486
KNB49553.1
Ion channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.466
Your Current Organism:
Streptomyces caatingaensis
NCBI taxonomy Id: 1678637
Other names: S. caatingaensis
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.