STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNB53943.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)    
Predicted Functional Partners:
KNB52332.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.595
KNB52451.1
Copper-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.584
KNB54267.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.531
KNB52054.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.498
KNB49415.1
C1 regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.468
KNB49283.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.464
KNB53944.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.454
KNB50814.1
Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.452
KNB52219.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.448
KNB52333.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.434
Your Current Organism:
Streptomyces caatingaensis
NCBI taxonomy Id: 1678637
Other names: S. caatingaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.