KNB52651.1 protein (Streptomyces caatingaensis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

KNB52651.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (78 aa)

Predicted Functional Partners:

KNB51672.1

0.671

KNB51211.1

0.656

KNB52649.1

0.575

KNB51369.1

0.497

KNB51367.1

0.482

KNB51210.1

0.482

KNB50221.1

0.482

KNB49216.1

0.482

KNB49315.1

0.482

KNB54428.1

0.472

Your Current Organism:

Streptomyces caatingaensis

NCBI taxonomy Id: 1678637
Other names: S. caatingaensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KNB49216.1	KNB49315.1	AC230_28300	AC230_29005	Plasmid transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.527
KNB49216.1	KNB51211.1	AC230_28300	AC230_19045	Plasmid transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
KNB49216.1	KNB51369.1	AC230_28300	AC230_17520	Plasmid transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.422
KNB49216.1	KNB52651.1	AC230_28300	AC230_08295	Plasmid transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.482
KNB49315.1	KNB49216.1	AC230_29005	AC230_28300	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Plasmid transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.527
KNB49315.1	KNB50221.1	AC230_29005	AC230_26460	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Plasmid transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.406
KNB49315.1	KNB51211.1	AC230_29005	AC230_19045	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
KNB49315.1	KNB51369.1	AC230_29005	AC230_17520	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.422
KNB49315.1	KNB52651.1	AC230_29005	AC230_08295	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.482
KNB50221.1	KNB49315.1	AC230_26460	AC230_29005	Plasmid transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.406
KNB50221.1	KNB51211.1	AC230_26460	AC230_19045	Plasmid transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
KNB50221.1	KNB51369.1	AC230_26460	AC230_17520	Plasmid transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.422
KNB50221.1	KNB52651.1	AC230_26460	AC230_08295	Plasmid transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.482
KNB51210.1	KNB51211.1	AC230_19040	AC230_19045	Secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KNB51210.1	KNB51369.1	AC230_19040	AC230_17520	Secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.422
KNB51210.1	KNB52651.1	AC230_19040	AC230_08295	Secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.482
KNB51211.1	KNB49216.1	AC230_19045	AC230_28300	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Plasmid transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
KNB51211.1	KNB49315.1	AC230_19045	AC230_29005	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
KNB51211.1	KNB50221.1	AC230_19045	AC230_26460	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Plasmid transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
KNB51211.1	KNB51210.1	AC230_19045	AC230_19040	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999