STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNB52678.1NYN domain containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (422 aa)    
Predicted Functional Partners:
KNB52677.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.763
KNB53661.1
Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.755
KNB51539.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.723
KNB49752.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.715
KNB53892.1
Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.713
KNB49408.1
Peptidase M6; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.713
KNB53067.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.699
KNB50223.1
SpdA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.689
KNB49218.1
SpdA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.682
KNB52676.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.678
Your Current Organism:
Streptomyces caatingaensis
NCBI taxonomy Id: 1678637
Other names: S. caatingaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.