STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNB52872.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1367 aa)    
Predicted Functional Partners:
KNB52873.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.971
KNB50015.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.762
KNB54234.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.757
KNB50723.1
Peptidase M9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.739
KNB54314.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.714
KNB53912.1
LmbE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.696
KNB54075.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.694
KNB53351.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.681
KNB53623.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.667
KNB50309.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.667
Your Current Organism:
Streptomyces caatingaensis
NCBI taxonomy Id: 1678637
Other names: S. caatingaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.