STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNB51459.1Peptidase; Extracellular zinc metalloprotease. (537 aa)    
Predicted Functional Partners:
KNB50054.1
Leupeptin-inactivating enzyme 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.810
KNB54265.1
Flagellar biosynthesis anti-sigma factor FlgM; Extracellular zinc metalloprotease.
  
  
 
0.779
KNB51458.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.584
KNB52228.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.502
KNB53227.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.462
KNB52922.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M7 family.
  
   
 0.460
KNB49403.1
Chitin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.449
KNB51457.1
Puromycin resistance protein pur8; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.
       0.402
KNB53937.1
Streptogrisin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.401
KNB51460.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.401
Your Current Organism:
Streptomyces caatingaensis
NCBI taxonomy Id: 1678637
Other names: S. caatingaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.