STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNB51686.1Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family. (563 aa)    
Predicted Functional Partners:
KNB50446.1
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.980
KNB51979.1
beta-N-acetylglucosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.943
KNB49336.1
beta-N-acetylhexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.939
KNB51873.1
Sugar hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.928
KNB53929.1
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.831
KNB51687.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.733
KNB51688.1
Pilus assembly protein CpaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.690
KNB51689.1
Septum formation initiator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.689
KNB51690.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.651
KNB50918.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.624
Your Current Organism:
Streptomyces caatingaensis
NCBI taxonomy Id: 1678637
Other names: S. caatingaensis
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.