STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNB51695.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (201 aa)    
Predicted Functional Partners:
KNB51694.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.879
KNB51999.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.848
KNB51692.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.777
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.770
KNB53684.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.769
KNB53811.1
TolB-like translocation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.766
KNB52342.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.766
KNB51924.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.766
KNB51691.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.764
KNB51688.1
Pilus assembly protein CpaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.754
Your Current Organism:
Streptomyces caatingaensis
NCBI taxonomy Id: 1678637
Other names: S. caatingaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.