STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNB51806.1NYN domain containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)    
Predicted Functional Partners:
KNB53661.1
Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.750
KNB50223.1
SpdA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.733
KNB49218.1
SpdA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.733
KNB49752.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.700
KNB52266.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.672
trmB
tRNA (guanine-N7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.618
KNB50509.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.596
KNB49647.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.596
KNB49630.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.595
KNB50221.1
Plasmid transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.593
Your Current Organism:
Streptomyces caatingaensis
NCBI taxonomy Id: 1678637
Other names: S. caatingaensis
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