KNB50873.1 protein (Streptomyces caatingaensis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

KNB50873.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (363 aa)

Predicted Functional Partners:

KNB51671.1

0.737

KNB50191.1

0.707

KNB49287.1

0.705

KNB50223.1

0.682

KNB49218.1

0.671

KNB51433.1

0.648

KNB49666.1

0.648

KNB49752.1

0.643

KNB49821.1

0.629

KNB52859.1

0.622

Your Current Organism:

Streptomyces caatingaensis

NCBI taxonomy Id: 1678637
Other names: S. caatingaensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KNB49218.1	KNB49287.1	AC230_28310	AC230_28805	SpdA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.553
KNB49218.1	KNB49666.1	AC230_28310	AC230_23005	SpdA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine-threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.541
KNB49218.1	KNB49752.1	AC230_28310	AC230_23495	SpdA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.756
KNB49218.1	KNB49821.1	AC230_28310	AC230_24020	SpdA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.599
KNB49218.1	KNB50191.1	AC230_28310	AC230_26250	SpdA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.739
KNB49218.1	KNB50873.1	AC230_28310	AC230_19710	SpdA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.671
KNB49218.1	KNB51433.1	AC230_28310	AC230_13640	SpdA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.681
KNB49218.1	KNB51671.1	AC230_28310	AC230_15135	SpdA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.759
KNB49218.1	KNB52859.1	AC230_28310	AC230_09500	SpdA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Htaa domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.678
KNB49287.1	KNB49218.1	AC230_28805	AC230_28310	Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	SpdA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.553
KNB49287.1	KNB49666.1	AC230_28805	AC230_23005	Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine-threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.576
KNB49287.1	KNB49752.1	AC230_28805	AC230_23495	Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.725
KNB49287.1	KNB49821.1	AC230_28805	AC230_24020	Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.772
KNB49287.1	KNB50191.1	AC230_28805	AC230_26250	Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.730
KNB49287.1	KNB50223.1	AC230_28805	AC230_26470	Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	SpdA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567
KNB49287.1	KNB50873.1	AC230_28805	AC230_19710	Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.705
KNB49287.1	KNB51433.1	AC230_28805	AC230_13640	Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.769
KNB49287.1	KNB51671.1	AC230_28805	AC230_15135	Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.767
KNB49287.1	KNB52859.1	AC230_28805	AC230_09500	Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Htaa domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.660
KNB49666.1	KNB49218.1	AC230_23005	AC230_28310	Serine-threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	SpdA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.541