STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNB50747.1Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family. (354 aa)    
Predicted Functional Partners:
KNB50446.1
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.951
KNB53929.1
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.805
KNB52981.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.696
KNB50694.1
Acetylhydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.635
KNB52448.1
Peptidase M6; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.610
KNB49403.1
Chitin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.610
KNB50746.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.578
KNB53994.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.563
KNB50569.1
3-demethylubiquinone-9 3-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.559
KNB51935.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.555
Your Current Organism:
Streptomyces caatingaensis
NCBI taxonomy Id: 1678637
Other names: S. caatingaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.