STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNB49693.1Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family. (760 aa)    
Predicted Functional Partners:
KNB49692.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.881
KNB49494.1
4-alpha-glucanotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.832
KNB49984.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family.
  
  
 
0.824
KNB49418.1
Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.816
acnA
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
    
   0.796
KNB53110.1
6-phospho-beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.793
KNB54279.1
6-phospho-beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.785
KNB50584.1
Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.763
KNB52819.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.735
KNB51006.1
Trehalose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.735
Your Current Organism:
Streptomyces caatingaensis
NCBI taxonomy Id: 1678637
Other names: S. caatingaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.