STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNB49912.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (518 aa)    
Predicted Functional Partners:
KNB53788.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.735
KNB51672.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.671
KNB51211.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.656
KNB49913.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
       0.581
KNB52649.1
Calcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.575
KNB52637.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.536
KNB54428.1
Peptidase S41; Degrades oligopeptides; Belongs to the peptidase S41B family.
  
   0.535
KNB51926.1
Endoglycoceramidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
  0.532
KNB53593.1
Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.529
KNB49920.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.516
Your Current Organism:
Streptomyces caatingaensis
NCBI taxonomy Id: 1678637
Other names: S. caatingaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.