STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNB49945.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)    
Predicted Functional Partners:
KNB52682.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.748
KNB51518.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.705
KNB49218.1
SpdA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.704
KNB50223.1
SpdA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.701
KNB51433.1
Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.700
KNB49041.1
DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.698
KNB49428.1
Tat pathway signal sequence domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.685
KNB49752.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.672
KNB51902.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.662
KNB49063.1
Xaa-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.648
Your Current Organism:
Streptomyces caatingaensis
NCBI taxonomy Id: 1678637
Other names: S. caatingaensis
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.