STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNB49051.1Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. (425 aa)    
Predicted Functional Partners:
KNB52862.1
Peptidase M75; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.971
KNB49049.1
Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.966
KNB49050.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.949
KNB52864.1
Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.920
KNB49048.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.808
KNB49052.1
Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.779
KNB49047.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.685
KNB49947.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.565
KNB53346.1
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
     
  0.499
KNB49046.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.481
Your Current Organism:
Streptomyces caatingaensis
NCBI taxonomy Id: 1678637
Other names: S. caatingaensis
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