STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNB49209.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (489 aa)    
Predicted Functional Partners:
KNB54153.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.696
KNB53351.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.695
KNB49063.1
Xaa-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.690
KNB51949.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.687
KNB51948.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.683
KNB53031.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.681
KNB52693.1
Cell division protein DivIVA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.673
KNB50438.1
Cellulose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.668
KNB50193.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.645
KNB53912.1
LmbE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.640
Your Current Organism:
Streptomyces caatingaensis
NCBI taxonomy Id: 1678637
Other names: S. caatingaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.