STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALE54079.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (406 aa)    
Predicted Functional Partners:
ALE54080.1
Von Willebrand factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.642
ALE54081.1
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.499
ALE55145.1
Naphthalene 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.491
ALE55173.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.491
ALE55682.1
CDP-6-deoxy-delta-3,4-glucoseen reductase; Catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.491
ALE56458.1
Transaldolase; Maintains the balance of metabolites in the pentose-phosphate pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.486
ALE56625.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.481
ALE58097.1
Muconolactone delta-isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.446
ALE55220.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.435
guaA
GMP synthase; Contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.400
Your Current Organism:
Burkholderia sp. HB1
NCBI taxonomy Id: 1678678
Other names: B. sp. HB1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.