Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CPS_0012 | pepQ | CPS_0012 | CPS_0013 | Hypothetical protein; Identified by Glimmer2; putative. | Xaa-Pro dipeptidase; Splits dipeptides with a prolyl residue in the C-terminal position. | 0.572 |
| CPS_0014 | pepQ | CPS_0014 | CPS_0013 | Conserved hypothetical protein TIGR00257; Identified by match to protein family HMM PF01205; match to protein family HMM TIGR00257. | Xaa-Pro dipeptidase; Splits dipeptides with a prolyl residue in the C-terminal position. | 0.506 |
| CPS_0014 | trkH | CPS_0014 | CPS_0015 | Conserved hypothetical protein TIGR00257; Identified by match to protein family HMM PF01205; match to protein family HMM TIGR00257. | Trk system potassium uptake protein TrkH; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family. | 0.730 |
| CPS_1171 | pepQ | CPS_1171 | CPS_0013 | Putative membrane protein; Identified by match to protein family HMM PF06738. | Xaa-Pro dipeptidase; Splits dipeptides with a prolyl residue in the C-terminal position. | 0.449 |
| CPS_1447 | pepQ | CPS_1447 | CPS_0013 | Putative D-amino acid dehydrogenase, small subunit; Identified by similarity to SP:P29011; match to protein family HMM PF01266. | Xaa-Pro dipeptidase; Splits dipeptides with a prolyl residue in the C-terminal position. | 0.708 |
| CPS_1707 | pepQ | CPS_1707 | CPS_0013 | Putative protein kinase; Identified by match to protein family HMM PF00069. | Xaa-Pro dipeptidase; Splits dipeptides with a prolyl residue in the C-terminal position. | 0.423 |
| mdh | pepQ | CPS_4514 | CPS_0013 | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. | Xaa-Pro dipeptidase; Splits dipeptides with a prolyl residue in the C-terminal position. | 0.408 |
| mdh | recA | CPS_4514 | CPS_4134 | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.401 |
| mdh | trpC/F | CPS_4514 | CPS_3525 | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. | Indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; Identified by similarity to SP:P00910; match to protein family HMM PF00218; match to protein family HMM PF00697; Belongs to the TrpC family. | 0.526 |
| pepQ | CPS_0012 | CPS_0013 | CPS_0012 | Xaa-Pro dipeptidase; Splits dipeptides with a prolyl residue in the C-terminal position. | Hypothetical protein; Identified by Glimmer2; putative. | 0.572 |
| pepQ | CPS_0014 | CPS_0013 | CPS_0014 | Xaa-Pro dipeptidase; Splits dipeptides with a prolyl residue in the C-terminal position. | Conserved hypothetical protein TIGR00257; Identified by match to protein family HMM PF01205; match to protein family HMM TIGR00257. | 0.506 |
| pepQ | CPS_1171 | CPS_0013 | CPS_1171 | Xaa-Pro dipeptidase; Splits dipeptides with a prolyl residue in the C-terminal position. | Putative membrane protein; Identified by match to protein family HMM PF06738. | 0.449 |
| pepQ | CPS_1447 | CPS_0013 | CPS_1447 | Xaa-Pro dipeptidase; Splits dipeptides with a prolyl residue in the C-terminal position. | Putative D-amino acid dehydrogenase, small subunit; Identified by similarity to SP:P29011; match to protein family HMM PF01266. | 0.708 |
| pepQ | CPS_1707 | CPS_0013 | CPS_1707 | Xaa-Pro dipeptidase; Splits dipeptides with a prolyl residue in the C-terminal position. | Putative protein kinase; Identified by match to protein family HMM PF00069. | 0.423 |
| pepQ | mdh | CPS_0013 | CPS_4514 | Xaa-Pro dipeptidase; Splits dipeptides with a prolyl residue in the C-terminal position. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. | 0.408 |
| pepQ | recA | CPS_0013 | CPS_4134 | Xaa-Pro dipeptidase; Splits dipeptides with a prolyl residue in the C-terminal position. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.469 |
| pepQ | trkH | CPS_0013 | CPS_0015 | Xaa-Pro dipeptidase; Splits dipeptides with a prolyl residue in the C-terminal position. | Trk system potassium uptake protein TrkH; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family. | 0.476 |
| pepQ | trpC/F | CPS_0013 | CPS_3525 | Xaa-Pro dipeptidase; Splits dipeptides with a prolyl residue in the C-terminal position. | Indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; Identified by similarity to SP:P00910; match to protein family HMM PF00218; match to protein family HMM PF00697; Belongs to the TrpC family. | 0.449 |
| recA | mdh | CPS_4134 | CPS_4514 | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. | 0.401 |
| recA | pepQ | CPS_4134 | CPS_0013 | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Xaa-Pro dipeptidase; Splits dipeptides with a prolyl residue in the C-terminal position. | 0.469 |
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