Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CPS_0029 | CPS_0031 | CPS_0029 | CPS_0031 | Outer membrane protein, OmpW family; Identified by match to protein family HMM PF03922. | Hypothetical protein; Identified by Glimmer2; putative. | 0.478 |
| CPS_0029 | aroE | CPS_0029 | CPS_0030 | Outer membrane protein, OmpW family; Identified by match to protein family HMM PF03922. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.498 |
| CPS_0031 | CPS_0029 | CPS_0031 | CPS_0029 | Hypothetical protein; Identified by Glimmer2; putative. | Outer membrane protein, OmpW family; Identified by match to protein family HMM PF03922. | 0.478 |
| CPS_0031 | aroE | CPS_0031 | CPS_0030 | Hypothetical protein; Identified by Glimmer2; putative. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.737 |
| aroE | CPS_0029 | CPS_0030 | CPS_0029 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Outer membrane protein, OmpW family; Identified by match to protein family HMM PF03922. | 0.498 |
| aroE | CPS_0031 | CPS_0030 | CPS_0031 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Hypothetical protein; Identified by Glimmer2; putative. | 0.737 |