Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CPS_0280Putative xanthine dehydrogenase accessory factor; Identified by similarity to OMNI:PP2480; match to protein family HMM PF02625. (347 aa)    
Predicted Functional Partners:
CPS_0279
Conserved hypothetical protein; Identified by similarity to OMNI:PP2483.
 
  
 0.973
iorB
Isoquinoline 1-oxidoreductase, beta subunit; Identified by similarity to SP:Q51698; match to protein family HMM PF01315; match to protein family HMM PF02738; match to protein family HMM TIGR01409.
 
  
 0.938
iorA
Isoquinoline 1-oxidoreductase, alpha subunit; Identified by similarity to SP:Q51697; match to protein family HMM PF00111; match to protein family HMM PF01799.
 
  
 0.936
CPS_4864
Xanthine dehydrogenase, iron-sulfur binding subunit; Identified by similarity to GP:2956674; match to protein family HMM PF00111; match to protein family HMM PF00941; match to protein family HMM PF01799; match to protein family HMM PF03450.
 
  
 0.718
CPS_4865
Xanthine dehydrogenase, molybdopterin binding subunit; Identified by similarity to GP:18655921; match to protein family HMM PF01315; match to protein family HMM PF02738.
 
  
 0.628
CPS_0281
PqiB family protein; Identified by similarity to SP:P43671.
       0.523
Your Current Organism:
Colwellia psychrerythraea
NCBI taxonomy Id: 167879
Other names: C. psychrerythraea 34H, Colwellia psychrerythraea 34H, Colwellia psychrerythraea str. 34H, Colwellia psychrerythraea strain 34H, Colwellia sp. 34H
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