Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CPS_0337 | CPS_0338 | CPS_0337 | CPS_0338 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM PF00076. | 0.518 |
| CPS_0338 | CPS_0337 | CPS_0338 | CPS_0337 | Identified by match to protein family HMM PF00076. | Hypothetical protein; Identified by Glimmer2; putative. | 0.518 |
| CPS_0338 | CPS_0436 | CPS_0338 | CPS_0436 | Identified by match to protein family HMM PF00076. | Conserved hypothetical protein; Identified by similarity to GP:2160521; match to protein family HMM PF00400. | 0.551 |
| CPS_0338 | CPS_1201 | CPS_0338 | CPS_1201 | Identified by match to protein family HMM PF00076. | Ferredoxin, 4Fe-4S; Identified by match to protein family HMM PF00037. | 0.643 |
| CPS_0338 | CPS_2623 | CPS_0338 | CPS_2623 | Identified by match to protein family HMM PF00076. | Identified by match to protein family HMM PF00753; match to protein family HMM PF07521. | 0.832 |
| CPS_0338 | CPS_4706 | CPS_0338 | CPS_4706 | Identified by match to protein family HMM PF00076. | Putative lipoprotein; Identified by match to protein family HMM PF00400. | 0.537 |
| CPS_0338 | fdhB1 | CPS_0338 | CPS_2057 | Identified by match to protein family HMM PF00076. | Formate dehydrogenase, beta subunit; Identified by similarity to GP:3724144; match to protein family HMM PF01512. | 0.505 |
| CPS_0338 | gpmA | CPS_0338 | CPS_4391 | Identified by match to protein family HMM PF00076. | Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.906 |
| CPS_0338 | rpoA | CPS_0338 | CPS_0626 | Identified by match to protein family HMM PF00076. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.640 |
| CPS_0338 | rpoB | CPS_0338 | CPS_4769 | Identified by match to protein family HMM PF00076. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.598 |
| CPS_0338 | rpoZ | CPS_0338 | CPS_4972 | Identified by match to protein family HMM PF00076. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.606 |
| CPS_0436 | CPS_0338 | CPS_0436 | CPS_0338 | Conserved hypothetical protein; Identified by similarity to GP:2160521; match to protein family HMM PF00400. | Identified by match to protein family HMM PF00076. | 0.551 |
| CPS_0436 | CPS_2623 | CPS_0436 | CPS_2623 | Conserved hypothetical protein; Identified by similarity to GP:2160521; match to protein family HMM PF00400. | Identified by match to protein family HMM PF00753; match to protein family HMM PF07521. | 0.834 |
| CPS_0436 | gpmA | CPS_0436 | CPS_4391 | Conserved hypothetical protein; Identified by similarity to GP:2160521; match to protein family HMM PF00400. | Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.659 |
| CPS_0436 | rpoA | CPS_0436 | CPS_0626 | Conserved hypothetical protein; Identified by similarity to GP:2160521; match to protein family HMM PF00400. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.549 |
| CPS_0436 | rpoB | CPS_0436 | CPS_4769 | Conserved hypothetical protein; Identified by similarity to GP:2160521; match to protein family HMM PF00400. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.592 |
| CPS_0436 | rpoZ | CPS_0436 | CPS_4972 | Conserved hypothetical protein; Identified by similarity to GP:2160521; match to protein family HMM PF00400. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.566 |
| CPS_1201 | CPS_0338 | CPS_1201 | CPS_0338 | Ferredoxin, 4Fe-4S; Identified by match to protein family HMM PF00037. | Identified by match to protein family HMM PF00076. | 0.643 |
| CPS_1201 | fdhB1 | CPS_1201 | CPS_2057 | Ferredoxin, 4Fe-4S; Identified by match to protein family HMM PF00037. | Formate dehydrogenase, beta subunit; Identified by similarity to GP:3724144; match to protein family HMM PF01512. | 0.958 |
| CPS_2623 | CPS_0338 | CPS_2623 | CPS_0338 | Identified by match to protein family HMM PF00753; match to protein family HMM PF07521. | Identified by match to protein family HMM PF00076. | 0.832 |
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