STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPS_0692Conserved hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. (731 aa)    
Predicted Functional Partners:
CPS_4796
Conserved hypothetical protein; Identified by match to protein family HMM PF00326; match to protein family HMM PF07676.
  
   
 0.742
CPS_1104
Dipeptidyl peptidase IV; Identified by similarity to GP:1753197; match to protein family HMM PF00326; match to protein family HMM PF00930.
  
   
 0.625
CPS_3309
Putative phosphonate ABC transporter, periplasmic phosphonate-binding protein; Identified by similarity to SP:P16682; match to protein family HMM TIGR01098.
   
    0.572
CPS_2702
Peptidase, M28 family; Identified by match to protein family HMM PF01546; match to protein family HMM PF04389.
 
  
 0.522
CPS_0554
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01NSA0344.
  
    0.488
CPS_1452
Putative membrane protein; Identified by match to protein family HMM PF07690.
  
     0.475
CPS_1585
Identified by match to protein family HMM PF01401.
  
     0.470
CPS_0577
Sensor histidine kinase; Identified by similarity to SP:Q04850; match to protein family HMM PF00512; match to protein family HMM PF02518.
  
     0.454
CPS_3091
Putative peptidase, M28 family; Identified by match to protein family HMM PF01546; match to protein family HMM PF04389.
 
  
 0.451
CPS_3470
Neutral zinc metallopeptidase, M1 family; Identified by match to protein family HMM PF01433.
  
    0.429
Your Current Organism:
Colwellia psychrerythraea
NCBI taxonomy Id: 167879
Other names: C. psychrerythraea 34H, Colwellia psychrerythraea 34H, Colwellia psychrerythraea str. 34H, Colwellia psychrerythraea strain 34H, Colwellia sp. 34H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.