Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CPS_0079 | CPS_0178 | CPS_0079 | CPS_0178 | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549. | Oxidoreductase, NAD-binding; Identified by match to protein family HMM PF00175. | 0.905 |
| CPS_0079 | CPS_3987 | CPS_0079 | CPS_3987 | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549. | Identified by match to protein family HMM PF00149. | 0.901 |
| CPS_0079 | ribD | CPS_0079 | CPS_0730 | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549. | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.942 |
| CPS_0079 | ribE1 | CPS_0079 | CPS_0731 | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549. | Riboflavin synthase, alpha subunit; Identified by match to protein family HMM PF00677; match to protein family HMM TIGR00187. | 0.905 |
| CPS_0079 | ribE2 | CPS_0079 | CPS_1531 | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family. | 0.904 |
| CPS_0079 | ribF | CPS_0079 | CPS_1181 | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549. | Riboflavin biosynthesis protein RibF; Identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; Belongs to the ribF family. | 0.915 |
| CPS_0178 | CPS_0079 | CPS_0178 | CPS_0079 | Oxidoreductase, NAD-binding; Identified by match to protein family HMM PF00175. | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549. | 0.905 |
| CPS_0178 | CPS_3987 | CPS_0178 | CPS_3987 | Oxidoreductase, NAD-binding; Identified by match to protein family HMM PF00175. | Identified by match to protein family HMM PF00149. | 0.904 |
| CPS_0178 | ribB | CPS_0178 | CPS_0732 | Oxidoreductase, NAD-binding; Identified by match to protein family HMM PF00175. | 3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. | 0.623 |
| CPS_0178 | ribE1 | CPS_0178 | CPS_0731 | Oxidoreductase, NAD-binding; Identified by match to protein family HMM PF00175. | Riboflavin synthase, alpha subunit; Identified by match to protein family HMM PF00677; match to protein family HMM TIGR00187. | 0.902 |
| CPS_0178 | ribF | CPS_0178 | CPS_1181 | Oxidoreductase, NAD-binding; Identified by match to protein family HMM PF00175. | Riboflavin biosynthesis protein RibF; Identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; Belongs to the ribF family. | 0.910 |
| CPS_1824 | ribA | CPS_1824 | CPS_4061 | Putative GTP cyclohydrolase II; Identified by match to protein family HMM PF00925. | GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. | 0.914 |
| CPS_1824 | ribB | CPS_1824 | CPS_0732 | Putative GTP cyclohydrolase II; Identified by match to protein family HMM PF00925. | 3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. | 0.987 |
| CPS_1824 | ribD | CPS_1824 | CPS_0730 | Putative GTP cyclohydrolase II; Identified by match to protein family HMM PF00925. | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.997 |
| CPS_1824 | ribE1 | CPS_1824 | CPS_0731 | Putative GTP cyclohydrolase II; Identified by match to protein family HMM PF00925. | Riboflavin synthase, alpha subunit; Identified by match to protein family HMM PF00677; match to protein family HMM TIGR00187. | 0.982 |
| CPS_1824 | ribE2 | CPS_1824 | CPS_1531 | Putative GTP cyclohydrolase II; Identified by match to protein family HMM PF00925. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family. | 0.950 |
| CPS_3987 | CPS_0079 | CPS_3987 | CPS_0079 | Identified by match to protein family HMM PF00149. | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549. | 0.901 |
| CPS_3987 | CPS_0178 | CPS_3987 | CPS_0178 | Identified by match to protein family HMM PF00149. | Oxidoreductase, NAD-binding; Identified by match to protein family HMM PF00175. | 0.904 |
| CPS_3987 | ribE1 | CPS_3987 | CPS_0731 | Identified by match to protein family HMM PF00149. | Riboflavin synthase, alpha subunit; Identified by match to protein family HMM PF00677; match to protein family HMM TIGR00187. | 0.900 |
| CPS_3987 | ribF | CPS_3987 | CPS_1181 | Identified by match to protein family HMM PF00149. | Riboflavin biosynthesis protein RibF; Identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; Belongs to the ribF family. | 0.905 |
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