STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPS_0817Alcohol dehydrogenase, class III; Identified by similarity to SP:P25437; match to protein family HMM PF00107; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (376 aa)    
Predicted Functional Partners:
CPS_0819
Putative esterase; Serine hydrolase involved in the detoxification of formaldehyde.
 0.999
CPS_3853
Alcohol dehydrogenase, zinc-containing; Identified by similarity to SP:P12311; match to protein family HMM PF00107.
  
 
0.967
CPS_4039
Putative glutathione-independent formaldehyde dehydrogenase; Identified by similarity to SP:P46154; match to protein family HMM PF00107.
  
 
0.921
exaA
Quinoprotein alcohol dehydrogenase; Identified by similarity to SP:Q9Z4J7; match to protein family HMM PF01011.
    
 0.918
CPS_0387
Identified by similarity to GP:16209569; match to protein family HMM PF00171.
 
 0.915
CPS_1885
Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
 
 0.915
CPS_4669
Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
 
 0.915
CPS_1431
Alcohol dehydrogenase, iron-containing; Identified by match to protein family HMM PF00465.
   
 
 0.845
CPS_4323
Conserved hypothetical protein; Identified by similarity to OMNI:NTL03PA01299; match to protein family HMM PF02583.
  
  
 0.761
argG
Argininosuccinate synthase; Identified by match to protein family HMM PF00764; match to protein family HMM TIGR00032; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
 
    
 0.740
Your Current Organism:
Colwellia psychrerythraea
NCBI taxonomy Id: 167879
Other names: C. psychrerythraea 34H, Colwellia psychrerythraea 34H, Colwellia psychrerythraea str. 34H, Colwellia psychrerythraea strain 34H, Colwellia sp. 34H
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