Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CPS_1007Putative decarboxylase; Identified by match to protein family HMM PF00282. (543 aa)    
Predicted Functional Partners:
gabT
4-aminobutyrate aminotransferase; Identified by similarity to SP:P22256; match to protein family HMM PF00202; match to protein family HMM TIGR00700; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.953
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
 0.938
CPS_0387
Identified by similarity to GP:16209569; match to protein family HMM PF00171.
   
 0.907
CPS_4669
Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
   
 0.907
CPS_4042
Amidase, hydantoinase/carbamoylase family; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01879.
   
 
 0.903
CPS_4059
Omega-amino acid--pyruvate aminotransferase; Identified by similarity to SP:P28269; match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 0.834
CPS_0099
Omega-amino acid--pyruvate aminotransferase; Identified by similarity to SP:P28269; match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 0.828
ansA
Identified by similarity to SP:P18840; match to protein family HMM PF00710; match to protein family HMM TIGR00519.
   
 
 0.828
aspA
Aspartate ammonia-lyase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR00839.
     
 0.826
argG
Argininosuccinate synthase; Identified by match to protein family HMM PF00764; match to protein family HMM TIGR00032; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
     
 0.813
Your Current Organism:
Colwellia psychrerythraea
NCBI taxonomy Id: 167879
Other names: C. psychrerythraea 34H, Colwellia psychrerythraea 34H, Colwellia psychrerythraea str. 34H, Colwellia psychrerythraea strain 34H, Colwellia sp. 34H
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