Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPS_1024Conserved hypothetical protein; Identified by similarity to OMNI:SO3512. (233 aa)    
Predicted Functional Partners:
CPS_1023
Putative tryptophan halogenase; Identified by similarity to GP:1710898; match to protein family HMM PF04820.
 
     0.885
CPS_1022
Putative tryptophan halogenase; Identified by similarity to GP:1710898.
 
     0.868
CPS_1021
TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01782.
 
     0.763
CPS_3700
Putative tryptophan halogenase; Identified by similarity to GP:1710898; match to protein family HMM PF04820.
 
     0.756
CPS_0992
Putative tryptophan halogenase; Identified by similarity to GP:1710898; match to protein family HMM PF04820.
 
     0.755
CPS_3734
Putative tryptophan halogenase; Identified by similarity to GP:1710898; match to protein family HMM PF04820.
 
     0.753
CPS_3699
Putative tryptophan halogenase; Identified by similarity to GP:1710898.
 
     0.739
CPS_0239
Putative tryptophan halogenase; Identified by similarity to GP:1710898.
 
     0.735
CPS_3737
TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01782.
 
     0.722
CPS_3735
PASS1 domain protein.
 
     0.708
Your Current Organism:
Colwellia psychrerythraea
NCBI taxonomy Id: 167879
Other names: C. psychrerythraea 34H, Colwellia psychrerythraea 34H, Colwellia psychrerythraea str. 34H, Colwellia psychrerythraea strain 34H, Colwellia sp. 34H
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.