Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CPS_1169 | bfr1 | CPS_1169 | CPS_1167 | Bacterioferritin-associated ferredoxin; Identified by similarity to SP:P13655; match to protein family HMM PF04324. | Bacterioferritin, subunit 1; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.850 |
| CPS_1169 | bfr2 | CPS_1169 | CPS_1168 | Bacterioferritin-associated ferredoxin; Identified by similarity to SP:P13655; match to protein family HMM PF04324. | Bacterioferritin, subunit 2; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.847 |
| CPS_2068 | bfr1 | CPS_2068 | CPS_1167 | Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches. | Bacterioferritin, subunit 1; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.467 |
| CPS_2068 | bfr2 | CPS_2068 | CPS_1168 | Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches. | Bacterioferritin, subunit 2; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.467 |
| CPS_2820 | bfr1 | CPS_2820 | CPS_1167 | Putative 2-methyl-cis-aconitic acid hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Bacterioferritin, subunit 1; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.743 |
| CPS_2820 | bfr2 | CPS_2820 | CPS_1168 | Putative 2-methyl-cis-aconitic acid hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Bacterioferritin, subunit 2; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.743 |
| CPS_2820 | icl | CPS_2820 | CPS_1232 | Putative 2-methyl-cis-aconitic acid hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Isocitrate lyase; Identified by similarity to GP:14971019; match to protein family HMM PF00463. | 0.865 |
| bfr1 | CPS_1169 | CPS_1167 | CPS_1169 | Bacterioferritin, subunit 1; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Bacterioferritin-associated ferredoxin; Identified by similarity to SP:P13655; match to protein family HMM PF04324. | 0.850 |
| bfr1 | CPS_2068 | CPS_1167 | CPS_2068 | Bacterioferritin, subunit 1; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches. | 0.467 |
| bfr1 | CPS_2820 | CPS_1167 | CPS_2820 | Bacterioferritin, subunit 1; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Putative 2-methyl-cis-aconitic acid hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 0.743 |
| bfr1 | bfr2 | CPS_1167 | CPS_1168 | Bacterioferritin, subunit 1; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Bacterioferritin, subunit 2; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.977 |
| bfr1 | hemH | CPS_1167 | CPS_1039 | Bacterioferritin, subunit 1; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.914 |
| bfr1 | icl | CPS_1167 | CPS_1232 | Bacterioferritin, subunit 1; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Isocitrate lyase; Identified by similarity to GP:14971019; match to protein family HMM PF00463. | 0.654 |
| bfr1 | nasA | CPS_1167 | CPS_4945 | Bacterioferritin, subunit 1; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Nitrate reductase; Identified by similarity to SP:Q06457; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04324; match to protein family HMM PF04879; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.657 |
| bfr2 | CPS_1169 | CPS_1168 | CPS_1169 | Bacterioferritin, subunit 2; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Bacterioferritin-associated ferredoxin; Identified by similarity to SP:P13655; match to protein family HMM PF04324. | 0.847 |
| bfr2 | CPS_2068 | CPS_1168 | CPS_2068 | Bacterioferritin, subunit 2; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches. | 0.467 |
| bfr2 | CPS_2820 | CPS_1168 | CPS_2820 | Bacterioferritin, subunit 2; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Putative 2-methyl-cis-aconitic acid hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 0.743 |
| bfr2 | bfr1 | CPS_1168 | CPS_1167 | Bacterioferritin, subunit 2; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Bacterioferritin, subunit 1; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.977 |
| bfr2 | hemH | CPS_1168 | CPS_1039 | Bacterioferritin, subunit 2; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.914 |
| bfr2 | icl | CPS_1168 | CPS_1232 | Bacterioferritin, subunit 2; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Isocitrate lyase; Identified by similarity to GP:14971019; match to protein family HMM PF00463. | 0.654 |
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