Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CPS_0215 | CPS_1352 | CPS_0215 | CPS_1352 | Conserved hypothetical protein; Identified by similarity to OMNI:SO2439. | Conserved hypothetical protein; Identified by similarity to GP:28806135. | 0.449 |
CPS_0409 | CPS_1352 | CPS_0409 | CPS_1352 | Identified by match to protein family HMM PF04509. | Conserved hypothetical protein; Identified by similarity to GP:28806135. | 0.402 |
CPS_0409 | CPS_4407 | CPS_0409 | CPS_4407 | Identified by match to protein family HMM PF04509. | Conserved hypothetical protein; Identified by similarity to OMNI:VCA0034. | 0.460 |
CPS_1352 | CPS_0215 | CPS_1352 | CPS_0215 | Conserved hypothetical protein; Identified by similarity to GP:28806135. | Conserved hypothetical protein; Identified by similarity to OMNI:SO2439. | 0.449 |
CPS_1352 | CPS_0409 | CPS_1352 | CPS_0409 | Conserved hypothetical protein; Identified by similarity to GP:28806135. | Identified by match to protein family HMM PF04509. | 0.402 |
CPS_1352 | CPS_4398 | CPS_1352 | CPS_4398 | Conserved hypothetical protein; Identified by similarity to GP:28806135. | Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches. | 0.499 |
CPS_1352 | CPS_4407 | CPS_1352 | CPS_4407 | Conserved hypothetical protein; Identified by similarity to GP:28806135. | Conserved hypothetical protein; Identified by similarity to OMNI:VCA0034. | 0.425 |
CPS_1352 | fliF | CPS_1352 | CPS_1502 | Conserved hypothetical protein; Identified by similarity to GP:28806135. | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.439 |
CPS_4398 | CPS_1352 | CPS_4398 | CPS_1352 | Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches. | Conserved hypothetical protein; Identified by similarity to GP:28806135. | 0.499 |
CPS_4398 | fliF | CPS_4398 | CPS_1502 | Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches. | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.546 |
CPS_4407 | CPS_0409 | CPS_4407 | CPS_0409 | Conserved hypothetical protein; Identified by similarity to OMNI:VCA0034. | Identified by match to protein family HMM PF04509. | 0.460 |
CPS_4407 | CPS_1352 | CPS_4407 | CPS_1352 | Conserved hypothetical protein; Identified by similarity to OMNI:VCA0034. | Conserved hypothetical protein; Identified by similarity to GP:28806135. | 0.425 |
CPS_4407 | fliF | CPS_4407 | CPS_1502 | Conserved hypothetical protein; Identified by similarity to OMNI:VCA0034. | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.585 |
fliF | CPS_1352 | CPS_1502 | CPS_1352 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Conserved hypothetical protein; Identified by similarity to GP:28806135. | 0.439 |
fliF | CPS_4398 | CPS_1502 | CPS_4398 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches. | 0.546 |
fliF | CPS_4407 | CPS_1502 | CPS_4407 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Conserved hypothetical protein; Identified by similarity to OMNI:VCA0034. | 0.585 |